Journal: BMC Bioinformatics
Article Title: DFBAlab: a fast and reliable MATLAB code for dynamic flux balance analysis
doi: 10.1186/s12859-014-0409-8
Figure Lengend Snippet: DFBAlab simulation results of example 2. Two cyclic steady states are presented. Simulation 1 (solid line) was performed with lexicographic objectives presented in Table , whereas simulation 2 (dashed line) used the negative of Objective 4 for algae. Significant differences can be observed in the predicted concentrations of yeast, glucose, and oxygen. Computation times for simulations 1 and 2 where 82 and 74 seconds, respectively.
Article Snippet: In this paper, we implement the LP feasibility problem combined with lexicographic optimization in our Dynamic Flux Balance Analysis laboratory (DFBAlab), a MATLAB code that performs fast, reliable and flexible community simulations.
Techniques: Algae